Agragose Gel Electrophoresis Lab Report

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Agarose Gel Electrophoresis Cell Biology 12/3/2013 Introduction The purpose of this lab is to determine the size and charge of the molecules separated by the process called gel electrophoresis. Electrophoresis was introduced by Arne Tiselius in the 1940’s through moving boundary electrophoresis with his Tiselius apparatus, which was based off of electrophoresis through a free solution. Gel electrophoresis on the other hand, used an Agarose gel for its separation and wasn’t introduced to the public until the 1950’s. Gel electrophoresis is used for the separation of components based on their size, shape, and charge. This technique is highly used on DNA, RNA, and proteins. This technique is all taken place in a gel electrophoresis chamber. The chamber includes a buffer solution, an Agarose gel, a cathode end, and an anode end. The cathode end of the chamber is negatively charged and will attract molecules that have a positive charge, while the anode end is positively charged and will attract molecules that are negatively charged. The buffer solution is used to keep the pH of the experiment at a constant number while carrying ions that are essential to hold a current. Agarose is a polysaccharide usually extracted from algae. It comes in a powder but when mixed with boiling water and poured into the chamber it transforms into a gel. A comb is put into place before the Agarose is poured to allow wells where samples will be deposited when the Agarose hardens. When Agarose is in a gel state it is filled with tiny pores that allow molecules to pass through. The sizes of these pores are determined by the concentration of Agarose in the solution; most solutions range from 0.7% to 2%. The higher the concentration of Agarose the smaller the pores in the gel are, while lower concentrations of Agarose enable larger pores. The Agarose gel is put into place, all samples

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