Cath Codes Essay

493 WordsDec 30, 20122 Pages
CLASS II hisRS 4 of 3.40.50.800[->0] 4 of 3.30.930.10[->1] Tetrameric PDB entry: 1adj Catalytic residue: Arg112 thrRS 1 of 1nyrA03 1 of 1nyrA04 1 of 1nyrB03 1 of 1nyrB04 From S. Aureus, 46% Seq. identity PDB entry: 1nyr Catalytic residue: Arg365 proRS 4 of 3.40.50.800[->2] 4 of 3.30.930.10[->3] 4 of 3.30.110.30[->4] PDB entry: 1hc7 Catalytic residue: Arg142 glyRS 2 of 3.40.50.800[->5] 2 of 3.30.930.10[->6] PDB entry: 1ati Catalytic residue: Arg220 pheRS (both subunits) 1 of 2.40.50.140[->7] 1 of 3.30.56.20[->8] 1 of 3.30.56.10[->9] 1 of 3.50.40.10[->10] 2 of 3.30.930.10[->11] 1 of 3.30.70.380[->12] PDB entry:1pys Catalytic residues: Ala314(A) - Arg204 aspRS 2 of 2.40.50.140[->13] 2 of 3.30.930.10[->14] 2 of 3.30.1360.30[->15] PDB entry: 1g51 Catalytic residue: Arg223 asnRS 1 of 2.40.50.140[->16] 1 of 3.30.930.10[->17] From Pyrococcus horikoshii, 46% Seq. identity PDB entry: 1x54 Catalytic residues: Arg211 - Arg408 - Glu228 lysRS 1 of 3e9hA01 1 of 3e9hA02 1 of 3e9hB01 1 of 3e9hB02 1 of 3e9hC01 1 of 3e9hC02 1 of 3e9hD01 1 of 3e9hD02 From Bacillus stearothermophilus, 49% Seq. identity PDB entry: 3E9H Catalytic residues: Arg253(A) - Arg470(A) - Glu269 Catalytic residue: Arg253 serRS 2 of 3.30.930.10[->18] 2 of 1.10.287.40[->19] From wild type T. thermophilus, 98% Seq. idenity PDB entry: 1sry Catalytic residues: Arg256(A) - Arg271(A) - Asp265(A) - Glu258(A) - Ser261(A) Catalytic residue: Arg256 [->0] - http://www.cathdb.info/cathnode/3.40.50.800 [->1] - http://www.cathdb.info/cathnode/3.30.930.10 [->2] - http://www.cathdb.info/cathnode/3.40.50.800 [->3] - http://www.cathdb.info/cathnode/3.30.930.10 [->4] - http://www.cathdb.info/cathnode/3.30.110.30 [->5] - http://www.cathdb.info/cathnode/3.40.50.800 [->6] - http://www.cathdb.info/cathnode/3.30.930.10 [->7] -

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